Deep Sequencing Data Analysis - Shomron, Noam.; SpringerLink (Online service) (Totowa, NJ : Humana Press : Imprint: Humana, 2013)
An Introduction to High-throughput Sequencing Experiments: Design and Bioinformatics Analysis -- Compressing Resequencing Data with GReEn ∗ -- On the Accuracy of Short Read Mapping -- Statistical Modeling of Coverage in High-Throughput Data -- Assembly Algorithms for Deep Sequencing Data: Basics and Pitfalls -- Short Reads Mapping for Exome Sequencing. Profiling Short Tandem Repeats from Short Reads -- Exome Sequencing Analysis: A Guide to Disease Variant Detection -- Identifying RNA Editing Sites in miRNAs by Deep Sequencing -- Identifying Differential Alternative Splicing Events from RNA Sequencing Data using RNASeq-MATS -- Optimizing Detection of Transcription Factor Binding Sites in ChIP-seq Experiments -- Statistical Analysis of ChIP-seq Data with MOSAiCS -- Detection of Reverse Transcriptase Termination Sites using cDNA Ligation and Massive Parallel Sequencing.
Keywords: Bioinformatics; Human genetics; Bioinformatics; Human Genetics