Microbiome Analysis : Methods and Protocols - Beiko, Robert G.; Hsiao, Will.; Parkinson, John.; SpringerLink (Online service) (New York, NY : Springer New York : Imprint: Humana, 2018)
Characterizing the Deep Terrestrial Subsurface Microbiome -- Freshwater Viromes: From Sampling to Evaluation -- Characterization of Eukaryotic Microbiome using 18S Amplicon Sequencing -- Culture and Molecular Profiling of the Respiratory Tract Microbiota -- Methods and Strategies to Examine the Human Breastmilk Microbiome -- Quantification of Vitamin B12-related Proteins in Marine Microbial Systems Using Selected Reaction Monitoring Mass Spectrometry -- Single-cell Genomics of Microbial Dark Matter -- 16S rRNA Gene Analysis with QIIME2 -- Processing a 16S rRNA Sequencing Dataset with the Microbiome Helper Workflow -- Normalization of Microbiome -- Predicting the Functional Potential of the Microbiome from Marker Genes using PICRUSt -- Using Compositional Data Analysis in Meta-transcriptomics -- Subsampled Assemblies and Hybrid Nucleotide Composition/Differential Coverage Binning For Genome-resolved Metagenomics -- Transkingdom Networks: A Systems Biology Approach to Identify Causal Members of Host-Microbiota Interactions -- Constructing and Analyzing Microbiome Networks in RBayesian Inference of Microbial Community Structure from Metagenomic data using BioMiCo -- Analyzing Metabolomic Pathways in Microbiomes -- Sparse Treatment-E_ect Model for Taxon Identi_cation with High-Dimensional Metagenomic Data.
Keywords: Genetics; Genetics and Genomics