Multiscale Approaches to Protein Modeling - Kolinski, Andrzej; SpringerLink (Online service) (New York, NY : Springer New York : Imprint: Springer, 2011)
Preface -- Lattice polymers and protein models -- Multiscale approach to protein and peptide docking -- Coarse-grained models of proteins: theory and applications -- Coarse-grained modeling of biomolecules with transferable force field -- Effective all-atom potentials for protein studies -- Statistical contact potentials in protein coarse-grained modeling: From pair to multi-body potentials -- Bridging the atomic and coarse-grained descriptions of collective motions in proteins -- Structure-based models of biomolecules: stretching of proteins, dynamics of knots, hydrodynamic effects, and indentation of virus capsids -- Sampling protein energy landscapes -the quest for efficient algorithms -- Protein structure prediction: from recognition of matches with known structures to recombination of fragments -- Genome-wide protein structure prediction using template fragment reassembly -- Multiscale approach to protein folding dynamics -- Error estimation of template-based protein structure models -- Evaluation of protein structure prediction methods: issues and strategies -- Index.
Keywords: Proteins .; Bioinformatics; Protein Science; Protein Structure; Bioinformatics; Computational Biology/Bioinformatics.