Systems Biology : Integrative Biology and Simulation Tools - Prokop, Aleš.; Csukás, Béla.; SpringerLink (Online service) (Dordrecht : Springer Netherlands : Imprint: Springer, 2013)
Functional genomics, proteomics, metabolomics and bioinformatics for systems biology -- Comparing biological networks: a survey on graph classifying techniques -- Emergent properties of gene regulatory networks - models and data -- Regulatory crosstalk analysis of biochemical networks in the nucleus accumbens -- Properties of biological networks -- Network analysis for systems biology -- Computational approaches for reconstruction of time-varying biological networks from Omics data -- Probabilistic graphical modeling in systems biology: a framework for integrative approaches -- Innovations of the rule-based modeling approach -- Reproducibility of model-based results in systems biology -- Parameter identifiability and redundancy, with applications to a general class of stochastic carcinogenesis models -- Semantic systems biology: formal knowledge representation in systems biology for model construction, retrieval, validation and discovery -- Computational infrastructures for data and knowledge management in systems biology -- Computational tools and resources for integrative modeling in systems biology -- Agent-based modeling approaches to multi-scale systems biology: An example agent-based model of acute pulmonary inflammation -- Reconstructing cellular signaling and regulatory networks - an integrative approach for systems-level drug discovery -- A survey of current integrative network algorithms for systems biology -- Direct Computer Mapping based modeling of a multiscale process, involving p53/miR-34a signaling.
Keywords: Medicine; Microbial genetics; Microbial genomics; Computer simulation; Biomedical engineering; Biomedicine, general; Microbial Genetics and Genomics; Simulation and Modeling; Biomedical Engineering and Bioengineering