Bacterial Molecular Networks : Methods and Protocols /

Detalles Bibliográficos
Autor Corporativo: SpringerLink (Online service)
Otros Autores: van Helden, Jacques. (Editor ), Toussaint, Ariane. (Editor ), Thieffry, Denis. (Editor )
Formato: eBook
Lenguaje:English
Publicado: Totowa, NJ : Humana Press : Imprint: Humana, 2012.
Edición:1st ed. 2012.
Colección:Methods in Molecular Biology, 804
Materias:
Tabla de Contenidos:
  • Bacterial Molecular Networks: Bridging the Gap Between Functional Genomics and Dynamical Modeling
  • Bacterial Interactomes: From Interactions to Networks
  • From Bacterial to Microbial Ecosystems (Metagenomics)
  • Prokaryote Genome Fluidity: Towards a System Approach of the Mobilome
  • Reticulate Classification of Mosaic Microbial Genomes using NeAT Website
  • From Metabolic Reactions to Networks and Pathways
  • Predicting Metabolic Pathways by Subnetwork Extraction
  • Directed Module Detection in a Large-scale Expression Compendium
  • Using Phylogenetic Profiles to Predict Functional Relationships
  • Extracting Regulatory Networks of Escherichia coli from RegulonDB
  • Browsing Metabolic and Regulatory Networks with BioCyc
  • Algorithms for Systematic Identification of Small Sub-graphs
  • The Degree Distribution of Networks: Statistical Model Selection
  • MAVisto: A Tool for Biological Network Motif Analysis
  • Using MCL to Extract Clusters from Networks
  • Protein Complex Prediction with RNSC (Method)
  • Network Analysis and Protein Function Prediction with the PRODISTIN Web Site
  • Using the NeAT Toolbox to Compare Networks to Networks, Clusters to Clusters, and Networks to Clusters
  • Analyzing Biological Data Using R: Methods for Graphs and Networks
  • Detecting Structural Invariants in Biological Reaction Networks
  • Petri nets in Snoopy: A Unifying Framework for the Graphical Display, Computational Modelling, and Simulation of Bacterial Regulatory Networks
  • Genetic Network Analyzer: A Tool for the Qualitative Modeling and Simulation of Bacterial Regulatory Networks
  • Logical Modelling of Gene Regulatory Networks with GINsim
  • Modelling the Evolution of Mutualistic Symbioses
  • Modelling the Onset of Virulence in Pathogenic Bacteria
  • Spatial Stochastic Cellular Modeling with the Smoldyn Simulator.