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Protein-Protein Interaction Networks : Methods and Protocols /

Bibliographic Details
Corporate Author: SpringerLink (Online service)
Other Authors: Canzar, Stefan. (Editor), Ringeling, Francisca Rojas. (Editor)
Format: eBook
Language:English
Published: New York, NY : Springer US : Imprint: Humana, 2020.
Edition:1st ed. 2020.
Series:Methods in Molecular Biology, 2074
Subjects:
Table of Contents:
  • Predicting Protein-Protein Interactions using SPRINT
  • Automated Extraction and Visualization of Protein-Protein Interaction Networks and Beyond: A Text Mining Protocol
  • Construction of Functional Protein Networks using Domain Profile Associations
  • Reconstruction of Protein-Protein Interaction Networks using Homology-Based Search: Application to the Autophagy Pathway of Ageing in Podospora anserina
  • Predicting Interacting Protein Pairs by Co-Evolutionary Paralog Matching
  • A Web-Based Protocol for Inter-Protein Contact Prediction by Deep Learning
  • Visual Analysis of Protein-Protein Interaction Docking Models using COZOID Tool
  • Path-LZerD: Predicting Assembly Order of Multimeric Protein Complexes
  • Embedding Alternative Conformations of Proteins in Protein-Protein Interaction Networks
  • Informed Use of Protein-Protein Interaction Data: A Focus on the Integrated Interactions Database (IID)
  • Generation and Interpretation of Context-Specific Human Protein-Protein Interaction Networks with HIPPIE
  • Explore Protein-Protein Interactions for Cancer Target Discovery using the OncoPPi Portal
  • Perform Pathway Enrichment Analysis using ReactomeFIViz
  • De Novo Pathway Enrichment with KeyPathwayMiner
  • De Novo Pathway-Based Classification of Breast Cancer Subtypes
  • Vienna Graph Clustering
  • On TD-WGcluster - Theoretical Foundations and Guidelines for the User
  • An Introductory Guide to Aligning Networks using SANA, the Simulated Annealing Network Aligner. .