Next Generation Microarray Bioinformatics : Methods and Protocols /
| Corporate Author: | |
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| Other Authors: | , , |
| Format: | eBook |
| Language: | English |
| Published: |
Totowa, NJ :
Humana Press : Imprint: Humana,
2012.
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| Edition: | 1st ed. 2012. |
| Series: | Methods in Molecular Biology,
802 |
| Subjects: |
Table of Contents:
- A Primer on the Current State of Microarray Technologies.- The KEGG Databases and Tools Facilitating Omics Analysis: Latest Developments Involving Human Diseases and Pharmaceuticals
- Strategies to Explore Functional Genomics Data Sets in NCBI's GEO Database.-Analyzing Cancer Samples with SNP Arrays
- Classification Approaches for Microarray Gene Expression Data Analysis.-Biclustering of Time Series Microarray Data
- Using the Bioconductor GeneAnswers Package to Interpret Gene Lists.- Analysis of Isoform Expression from Splicing Array using Multiple Comparisons.- Functional Comparison of Microarray Data across Multiple Platforms Using the Method of Percentage of Overlapping Functions
- Performance Comparison of Multiple Microarray Platforms for Gene Expression Profiling
- Integrative Approaches for Microarray Data Analysis-.Modelling Gene Regulation Networks using Ordinary Differential Equations
- Non-homogeneous Dynamic Bayesian Networks in Systems Biology.- Inference of Regulatory Networks from Microarray Data with R and the Bioconductor Package qpgraph
- Effective Nonlinear Methods for Inferring Genetic Regulation from Time-series Microarray Gene Expression Data
- An Overview of the Analysis of Next Generation Sequencing Data
- How to Analyze Gene Expression using RNA-Sequencing Data.- Analyzing ChIP-seq Data: Preprocessing, Normalization, Differential Identification and Binding Pattern Characterization
- Identifying Differential Histone Modification Sites from ChIP-seq Data
- ChIP-Seq Data Analysis: Identification of Protein-DNA Binding Sites with SISSRs Peak Finder
- Using ChIPMotifs for de novo Motif Discovery of OCT4 and ZNF263 based on ChIP-based High-throughput Experiments
- Hidden Markov Models for Controlling False Discovery Rate in Genome-Wide Association Analysis
- Employing Gene Set Top Scoring Pairs to Identify Deregulated Pathway-Signatures in Dilated Cardiomyopathy from Integrated Microarray Gene Expression Data.-JAMIE: A Software Tool for Jointly Analyzing Multiple ChIP-chip Experiments.- Epigenetic Analysis: ChIP-chip and ChIP-seq
- BiNGS!SL-seq: A Bioinformatics Pipeline for the Analysis and Interpretation of Deep Sequencing Genome-wide Synthetic Lethal Screen.