Plant Circadian Networks : Methods and Protocols /

Detalles Bibliográficos
Autor Corporativo: SpringerLink (Online service)
Otros Autores: Staiger, Dorothee. (Editor )
Formato: eBook
Lenguaje:English
Publicado: New York, NY : Springer New York : Imprint: Humana, 2014.
Edición:1st ed. 2014.
Colección:Methods in Molecular Biology, 1158
Materias:
Tabla de Contenidos:
  • Measurement of Luciferase Rhythms
  • Online Period Estimation and Determination of Rhythmicity in Circadian Data, using the BioDare Data Infrastructure
  • Global profiling of the circadian transcriptome using microarrays
  • ChIP-Seq analysis of histone modifications at the core of the Arabidopsis circadian clock
  • Quantitative transcriptome analysis using RNA-seq
  • Rapid and parallel quantification of small and large RNA species
  • The RIP per case – identification of RNA binding protein targets by RNA immunoprecipitation
  • A protocol for visual analysis of alternative splicing in RNA-Seq data using Integrated Genome Browser
  • AthaMap web tools for the analysis of transcriptional and post-transcriptional gene expression regulation in Arabidopsis thaliana
  • Analysis of mRNA translation states in Arabidopsis over the diurnal cycle by polysome microarray
  • Immunoprecipitation-based analysis of protein-protein interactions
  • Comparative Phosphoproteomics to Identify Targets of the Clock-Relevant Casein Kinase 1 in C. reinhardtii Flagella
  • Pulsed induction of circadian clock genes in Arabidopsis seedlings
  • The use of fluorescent proteins to analyze circadian rhythms
  • Measuring circadian oscillations of cytosolic-free calcium in Arabidopsis thaliana
  • Circadian life without micronutrients: effects of altered micronutrient supply on clock function in Arabidopsis
  • Assessing redox state and reactive oxygen species in circadian rhythmicity
  • Circadian regulation of plant immunity to pathogens
  • Determination of photoperiodic flowering time control in Arabidopsis and barley
  • The perennial clock is an essential timer for seasonal growth events and cold hardiness
  • Monitoring seasonal bud set, bud burst and cold hardiness in Populus
  • Transformation and Measurement of Bioluminescence Rhythms in the Moss Physcomitrella patens
  • Modeling and Simulating the Arabidopsis thaliana Circadian Clock Using XPP-AUTO.