Plant Chromatin Dynamics : Methods and Protocols /
| Autor Corporativo: | |
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| Otros Autores: | , |
| Formato: | eBook |
| Lenguaje: | English |
| Publicado: |
New York, NY :
Springer New York : Imprint: Humana,
2018.
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| Edición: | 1st ed. 2018. |
| Colección: | Methods in Molecular Biology,
1675 |
| Materias: |
Tabla de Contenidos:
- Section Overview: Profiling Developmentally and Environmentally Controlled Chromatin Reprogramming
- Profiling DNA Methylation using Bisulfite Sequencing (BS-Seq)
- Bisulfite Sequencing using Small DNA Amounts
- Identification of Differentially Methylated Regions in the Genome of Arabidopsis thaliana
- A Rapid and Efficient ChIP Protocol to Profile Chromatin Binding Proteins and Epigenetic Modifications in Arabidopsis
- Sequential ChIP Protocol for Profiling Bivalent Epigenetic Modifications (ReChIP)
- A Method to Identify Nucleolus-Associated Chromatin Domains (NADs)
- Cell Type-Specific Profiling of Chromatin Modifications and Associated Proteins
- Mapping of Histone Modifications in Plants by Tandem Mass Spectrometry
- Histone H1 Purification and Post-Translational Modification Profiling by High–Resolution Mass Spectrometry
- Profiling Nucleosome Occupancy by MNase-seq: Experimental Protocol and Computational Analysis
- Identification of Open Chromatin Regions in Plant Genomes using ATAC-Seq
- Section Overview: Unravelling the Complex Epigenetic Mechanisms that Regulate Gene Activity
- Technical Review: A Hitchhiker’s Guide to Chromosome Conformation Capture
- 3C in Maize and Arabidopsis
- Profiling Histone Modifications in Synchronised Floral Tissues for Quantitative Resolution of Chromatin and Transcriptome Dynamics
- De Novo Identification of sRNA Loci and Non-Coding RNAs by High-Throughput Sequencing
- Identification of in planta Protein-Protein Interactions using IP-MS
- RNA Immunoprecipitation Protocol to Identify Protein-RNA Interactions in Arabidopsis thaliana
- In vitro Assays to Measure Histone Methyltransferase Activity using Different Chromatin Substrates
- Identification of Parent-of-Origin-Dependent QTLs using Bulk-Segregant Sequencing (Bulk-Seq)
- QTLepi mapping in Arabidopsis thaliana
- Section Overview: a Compendium of Methods to Analyze the Spatial Organization of Plant Chromatin
- Localisation of Chromatin Marks in Arabidopsis Early Embryos
- Cell-type Specific Chromatin Analysis in Whole-mount Plant Tissues by Immunostaining
- Measuring Dynamics of Histone Proteins by Photobleaching in Arabidopsis Roots
- Fluorescence In Situ Hybridization (FISH) and Immunolabeling on 3D Preserved Nuclei
- High-Affinity LNA/DNA Mixmer Probes for Detection of Chromosome-Specific Polymorphisms of 5S rDNA Repeats in Arabidopsis thaliana
- A Method for Testing Random Spatial Model on Nuclear Object Distributions
- Technical Review: Cytogenetic Tools for Studying Mitotic Chromosomes
- Technical Review: Microscopy and Image Processing Tools to Analyse Plant Chromatin – practical Considerations
- Automated 3D Gene Position Analysis using a Customized Imaris Plugin: XTFISHInsideNucleus
- Quantitative 3D Analysis of Nuclear Morphology and Heterochromatin Organization from Whole Mount Plant Tissue using NucleusJ
- Transmission Electron Microscopy Imaging to Analyse Chromatin Density Distribution at the Nanoscale Level. .