Multi-scale Quantum Models for Biocatalysis Modern Techniques and Applications /

Bibliographic Details
Corporate Author: SpringerLink (Online service)
Other Authors: York, Darrin M. (Editor), Lee, Tai-Sung. (Editor)
Format: eBook
Language:English
Published: Dordrecht : Springer Netherlands : Imprint: Springer, 2009.
Edition:1st ed. 2009.
Series:Challenges and Advances in Computational Chemistry and Physics, 7
Subjects:
Online Access:https://doi.org/10.1007/978-1-4020-9956-4
Table of Contents:
  • Overview of Methodologies
  • Mixed Quantum-Classical Calculations in Biological Systems
  • The Oniom Method and its Applications to Enzymatic Reactions
  • Comparison Of Reaction Barriers In Energy And Free Energy For Enzyme Catalysis
  • Quantum Mechanical Methods for Biomolecular Simulations
  • Fast Quantum Models with Empirical Treatments
  • Towards an Accurate Semi-Empirical Molecular Orbital Treatment of Covalent and Non-Covalent Biological Interactions
  • Design Of Next Generation Force Fields From AB Initio Computations: Beyond Point Charges Electrostatics
  • "Multi-Scale" QM/MM Methods with Self-Consistent-Charge Density-Functional-Tight-Binding (SCC-DFTB)
  • Coarse-Grained Intermolecular Potentials Derived From The Effective Fragment Potential: Application To Water, Benzene, And Carbon Tetrachloride
  • Formalisms for the Explicit Inclusion of Electronic Polarizability in Molecular Modeling and Dynamics Studies
  • Biocatalysis Applications
  • Modeling Protonation Equilibria In Biological Macromolecules
  • Quantum Mechanical Studies of the Photophysics of DNA and RNA Bases
  • Ab Initio Quantum Mechanical/Molecular Mechanical Studies of Histone Modifying Enzymes
  • Interpreting The Observed Substrate Selectivity And The Product Regioselectivity In Orf2-Catalyzed Prenylation From X-Ray Structures
  • Unraveling the Mechanisms of Ribozyme Catalysis with Multiscale Simulations.