Plant Gene Regulatory Networks : Methods and Protocols /

Detalles Bibliográficos
Autor Corporativo: SpringerLink (Online service)
Otros Autores: Kaufmann, Kerstin. (Editor ), Mueller-Roeber, Bernd. (Editor )
Formato: eBook
Lenguaje:English
Publicado: New York, NY : Springer New York : Imprint: Humana, 2017.
Edición:1st ed. 2017.
Colección:Methods in Molecular Biology, 1629
Materias:
Tabla de Contenidos:
  • From Genes to Networks: Characterizing Gene-Regulatory Interactions in Plants
  • Inducible Promoter Systems for Gene Perturbation Experiments in Arabidopsis
  • Cell Type-Specific Gene Expression Profiling Using Fluorescence-Activated Nuclear Sorting
  • Characterization of Cell Type-Specific DNA Binding Sites of Plant Transcription Factors using Chromatin Immunoprecipitation
  • Yeast One and Two Hybrid High-Throughput Screenings using Arrayed Libraries
  • SELEX-Seq: A Method to Determine DNA-Binding Specificities of Plant Transcription Factors
  • Analysis of a Plant Transcriptional Regulatory Network using Transient Expression Systems
  • Analysis of In Vivo Chromatin and Protein Interactions of Arabidopsis Transcript Elongation Factors
  • Characterization of Mediator Complex and its Associated Proteins from Rice
  • DNase I SIM: A Simplified In-Nucleus Method for DNase I Hypersensitive Site Sequencing
  • In Situ Hi-C Library Preparation for Plants to Study their Three-Dimensional Chromatin Interactions on a Genome-Wide Scale
  • Multiplexed Transcriptional Activation or Repression in Plants using CRISPR-dCas9 Based Systems
  • Generation of dTALEs and Libraries of Synthetic TALE-Activated Promoters for Engineering of Gene Regulatory Networks in Plants
  • Design of Knowledge Bases for Plant Gene Regulatory Networks
  • AraNet: A Network Biology Server for Arabidopsis thaliana and Other Non-Model Plant Species
  • Integration of Genome-Wide TF Binding and Gene Expression Data to Characterize Gene Regulatory Networks in Plant Development
  • Predicting Transcription Factor-Binding Sites and their Cognate Transcription Factors using Gene Expression Data
  • Computational Approaches to Study Gene Regulatory Networks
  • Boolean Dynamic Modeling Approaches to Study Plant Gene Regulatory Networks: Integration, Validation and Prediction
  • ODE-Based Modeling of Complex Regulatory Circuits
  • Inferring Gene Regulatory Networks in the Arabidopsis Root using a Dynamic Bayesian Network Approach.