RNA Remodeling Proteins : Methods and Protocols /

Detalles Bibliográficos
Autor Corporativo: SpringerLink (Online service)
Otros Autores: Boudvillain, Marc. (Editor )
Formato: eBook
Lenguaje:English
Publicado: New York, NY : Springer New York : Imprint: Humana, 2015.
Edición:1st ed. 2015.
Colección:Methods in Molecular Biology, 1259
Materias:
Tabla de Contenidos:
  • Key Points to Consider When Studying RNA Remodeling by Proteins
  • Happy Birthday: 25 years of DEAD-box Proteins
  • In vivo Cross-linking Followed by polyA Enrichment to Identify Yeast mRNA Binding Proteins
  • Dynamics of the Spb4 Interactome Monitored by Affinity Purification
  • Using EMOTE to Map the Exact 5'-ends of Processed RNA on a Transcriptome-wide Scale
  • Cellular Localization of RNA Degradation and Processing Components in Escherichia coli
  • Recombineering Applications for the Mutational Analysis of Bacterial RNA-binding Proteins and Their Sites of Action
  • Determination of RNA Chaperone Activity Using an Escherichia coli Mutant
  • Biochemical Characterization of G4 Quadruplex Telomerase RNA Unwinding by the RNA Helicase RHAU
  • ATPase Site Configuration of the RNA Helicase DbpA Probed by ENDOR Spectroscopy
  • Bioinformatics and Biochemical Methods to Study the Structural and Functional Elements of DEAD-box RNA Helicases
  • Measuring Helicase Inhibition of the DEAD-box Protein Dbp2 by Yra1
  • A FRET-based, Continuous Assay for the Helicase Activity of DEAD-box Proteins
  • A Fluorescence-Based Screening Assay for Identification of Hepatitis C Virus NS3 Helicase Inhibitors and Characterization of Their Inhibitory Mechanism
  • Mechanisms of HCV NS3 Helicase Monitored by Optical Tweezers
  • Constructing a Magnetic Tweezers to Monitor RNA Translocation at the Single-molecule Level
  • Probing RNA Translocases with DNA
  • Monitoring RNA Unwinding by the Transcription Termination Factor Rho From Mycobacterium Tuberculosis
  • Characterization of the Mechanisms of Transcription Termination by the Helicase Sen1
  • Characterization of TRAP-mediated Regulation of the B. subtilis trp Operon Using in vitro Transcription and Transcriptional Reporter Fusions in vivo
  • Single-molecule FRET Characterization of RNA Remodeling Induced by an Antitermination Protein
  • Fluorescence Reporters for Hfq Oligomerization and RNA Annealing
  • Fluorescence Anisotropy-based Salt-titration Approach to Characterize Protein-Nucleic Acid Interactions
  • Probing Hfq:RNA Interactions with Hydroxyl Radical and RNase Footprinting
  • Purification of Eukaryotic Exoribonucleases Following Heterologous Expression in Bacteria and Analysis of Their Biochemical Properties by in vitro Enzymatic Assays
  • Tips and Tricks to Probe the RNA-degrading Activities of Hyperthermophilic Archaeal β-CASP Ribonucleases.