Plant Functional Genomics : Methods and Protocols /

Detalles Bibliográficos
Autor Corporativo: SpringerLink (Online service)
Otros Autores: Alonso, Jose M. (Editor ), Stepanova, Anna N. (Editor )
Formato: eBook
Lenguaje:English
Publicado: New York, NY : Springer New York : Imprint: Humana, 2015.
Edición:2nd ed. 2015.
Colección:Methods in Molecular Biology, 1284
Materias:
Tabla de Contenidos:
  • Epigenome Profiling of Specific Plant Cell Types Using a Streamlined INTACT Protocol and ChIP-seq
  • Whole-Genome DNA Methylation Profiling with Nucleotide Resolution
  • High-Throughput Nuclease-Mediated Probing of RNA Secondary Structure in Plant Transcriptomes
  • Genome-Wide Mapping of DNase I Hypersensitive Sites in Plants
  • Characterization of in-vivo DNA-Binding Events of Plant Transcription Factors by ChIP-seq: Experimental Protocol and Computational Analysis
  • Identification of Direct Targets of Plant Transcription Factors Using the GR Fusion Technique
  • Ribosome Profiling: A Tool for Quantitative Evaluation of Dynamics in mRNA Translation
  • Tissue-Specific Gene Expression Profiling by Cell Sorting
  • Translating Ribosome Affinity Purification (TRAP) Followed by RNA Sequencing Technology (TRAP-SEQ) for Quantitative Assessment of Plant Translatomes
  • Rapid Immunopurification of Ribonucleoprotein Complexes of Plants
  • Metabolomic Profiling of Plant Tissues
  • Targeted Plant Genome Editing via the CRISPR/Cas9 Technology
  • QTL Mapping Using High-Throughput Sequencing
  • Quantitating Plant MicroRNA-Mediated Target Repression Using a Dual-Luciferase Transient Expression System
  • Persistent Virus-Induced Gene Silencing in Asymptomatic Accessions of Arabidopsis
  • A User’s Guide to the Arabidopsis T-DNA Insertion Mutant Collections
  • Genome-Wide Association Mapping in Plants Exemplified for Root Growth in Arabidopsis thaliana
  • Tilling By Sequencing
  • SHOREmap v3.0: Fast and Accurate Identification of Causal Mutations from Forward Genetic Screens
  • Software-Assisted Stacking of Gene Modules Using GoldenBraid 2.0 DNA-Assembly Framework
  • Ligation Independent Cloning for Plant Research
  • Gene Functional Analysis Using Protoplast Transient Assays
  • Descriptive vs. Mechanistic Network Models in Plant Development in the Post-Genomic Era
  • Analysis and Visualization of RNA-Seq Expression Data Using RStudio, Bioconductor, and Integrated Genome Browser
  • Constructing Simple Biological Networks for Understanding Complex High-Throughput Data in Plants.