Nuclear Bodies and Noncoding RNAs : Methods and Protocols /

Detalles Bibliográficos
Autor Corporativo: SpringerLink (Online service)
Otros Autores: Nakagawa, Shinichi. (Editor ), Hirose, Tetsuro. (Editor )
Formato: eBook
Lenguaje:English
Publicado: New York, NY : Springer New York : Imprint: Humana, 2015.
Edición:1st ed. 2015.
Colección:Methods in Molecular Biology, 1262
Materias:
Tabla de Contenidos:
  • Visualization of lncRNA by Single Molecule Fluorescence in situ Hybridization
  • Super-resolution Imaging of Nuclear Bodies by STED Microscopy
  • High-resolution 3D DNA FISH Using Plasmid Probes and Computational Correction of Optical Aberrations to Study Chromatin Structure at the Sub-megabase Scale
  • Time-lapse Imaging of Nuclear Bodies
  • Visualization of Nucleic Acids with Synthetic Exciton-controlled Fluorescent Oligonucleotide Probes
  • Live CLEM Imaging to Analyze Nuclear Structures at High-resolution
  • Ultrastructural Analysis of Nuclear Bodies Using Electron Microscopy
  • Analyses of Nuclear Proteins and Nucleic Acid Structures Using Atomic Force Microscopy
  • Genome-wide Co-localization Screening of Nuclear Body Components Using a Fluorescently Tagged FLJ cDNA Clone Library
  • Purification of Specific Chromatin Regions Using Oligonucleotides: Capture Hybridization Analysis of RNA Targets (CHART)
  • RNA Antisense Purification (RAP) for Mapping RNA Interactions with Chromatin
  • In situ Dissection of RNA Functional Subunits by Domain-specific Chromatin Isolation by RNA Purification (dChIRP)
  • Extracting, Enriching and Identifying Nuclear Body Sub-complexes Using Label-based Quantitative Mass Spectrometry
  • Studying RNA-binding Protein Interactions with Target mRNAs in Eukaryotic Cells: Native Ribonucleoprotein Immunoprecipitation (RIP) Assays
  • Cross-linking and Immunoprecipitation of Nuclear RNA Binding Proteins
  • Purifications of Non-coding RNA and Bound Proteins using FLAG Peptide-conjugated Antisense-oligonucleotides
  • MMCT-Mediated Chromosome Engineering Technique Applicable to Functional Analysis of lncRNA and Nuclear Dynamics
  • Reconstitution of Nucleocytoplasmic Transport Using Digitonin-Permeabilized Cells
  • Genome-wide Analysis of Long Noncoding RNA Turnover
  • Knockdown of Nuclear-retained Long Noncoding RNAs Using Modified DNA Antisense Oligonucleotides
  • siRNA Screening of Nuclear Proteins.