Ubiquitin Family Modifiers and the Proteasome : Reviews and Protocols /

Detalles Bibliográficos
Autor Corporativo: SpringerLink (Online service)
Otros Autores: Dohmen, R. Jürgen. (Editor ), Scheffner, Martin. (Editor )
Formato: eBook
Lenguaje:English
Publicado: Totowa, NJ : Humana Press : Imprint: Humana, 2012.
Edición:1st ed. 2012.
Colección:Methods in Molecular Biology, 832
Materias:
Tabla de Contenidos:
  • Three Decades of Studies to Understand the Functions of the Ubiquitin Family
  • Structure and Evolution of Ubiquitin and Ubiquitin-Related Domains
  • Deciphering Tissue-Specific Ubiquitylation by Mass Spectrometry
  • Analysis of Cellular SUMO and SUMO-Ubiquitin Hybrid Conjugates
  • Recombinant Reconstitution of Sumoylation Reactions In vitro
  • Reconstitution of SUMO-Dependent Ubiquitylation In vitro
  • Detection and Analysis of FAT10 Modification
  • Isolation of NEDDylated Proteins in Human Cells
  • The ISG15 Conjugation System
  • Pupylation: Proteasomal Targeting by a Protein Modifier in Bacteria
  • Role of UbF Family Modifiers and their Binding Proteins in Cell Signaling
  • Isolation of Ubiquitylated Proteins using Tandem Ubiquitin-Binding Entities (TUBEs)
  • Using Linkage-Specific Monoclonal Antibodies to Analyze Cellular Ubiquitination
  • Measuring Rates of Ubiquitin Chain Formation as a Functional Readout of Ligase Activity
  • Synthesis and Analysis of K11-Linked Ubiquitin Chains
  • Synthesis and Analysis of Linear Ubiquitin Chains
  • Detection and Quantitation of SUMO Chains by Mass Spectrometry
  • Bioinformatical Detection of Recognition Factors for Ubiquitin and SUMO
  • Surface Plasmon Resonance to Measure Interactions of UbFs with Their Binding Partners
  • Identifying and Studying Ubiquitin Receptors by NMR
  • Exploring the Role of p97 and its UBX-Domain Cofactors Through Identification of Their Interacting Proteins
  • Assembly and Function of the Proteasome
  • Using Native Gel Electrophoresis and Phosphofluoroimaging to Analyse GFP-tagged Proteasomes
  • Disulfide Engineering to Map Subunit Interactions in the Proteasome and Other Macromolecular Complexes
  • Using DNA Damage Sensitivity Phenotypes to Characterize Mutations Affecting Proteasome Function
  • Analysing Properties of Proteasome Inhibitors using Kkinetic and X-Ray Crystallographic Studies
  • Immunoproteasome-Specific Inhibitors and Their Application
  • Binding of Ubiquitin Conjugates to Proteasomes as Visualized with Native Gels
  • Affinity Purification of Mmammalian 26S Proteasomes Using an Ubiquitin-Like Domain
  • Using siRNA Techniques to Dissect Proteasome Assembly Pathways in Mammalian Cells
  • Reconstitution of PA700, the 19S Regulatory Particle, from Purified Precursor Complexes
  • Cellular Responses to Misfolded Proteins and Protein Aggregates
  • Live-Cell Imaging of Ubiquitin-Proteasome System Function
  • Analysis of Chaperone-assisted Ubiquitylation
  • Use of CPY* and its Derivatives to Study Protein Quality Control in Various Cell Compartments
  • Assays to Measure ER-Associated Degradation in Yeast
  • SDS-PAGE Techniques to Study Ubiquitin-Like Conjugation Systems in Yeast Autophagy
  • Analysis of Ubiquitin-Dependent Proteolysis in C. elegans
  • Structural Insights into Functional Modes of Proteins Involved in Ubiquitin Family Pathways
  • Identification and Application of NEDD8 E1 Inhibitors
  • Formation of Ubiquitin Dimers via Azide Alkyne Click Reaction
  • Synthesis of Atypical Diubiquitin Chains
  • TIPI - TEV Protease-Mediated Induction of Protein Instability
  • PROTAC-Induced Proteolytic Targeting.