Single Nucleotide Polymorphisms : Methods and Protocols /

Single Nucleotide Polymorphisms : Methods and Protocols /

Bibliographic Details
Corporate Author: SpringerLink (Online service)
Other Authors: Komar, Anton A. (Editor)
Format: eBook
Language:English
Published: Totowa, NJ : Humana Press : Imprint: Humana, 2009.
Edition:2nd ed. 2009.
Series:Methods in Molecular Biology, 578
Subjects:
Human genetics.
Cell biology.
Medical genetics.
Human Genetics.
Cell Biology.
Gene Function.
Table of Contents:
  • to Single Nucleotide Polymorphisms
  • SNPs: Impact on Gene Function and Phenotype
  • Silent (Synonymous) SNPs: Should We Care About Them?
  • Bioinformatic Analysis of SNPs
  • SNP Databases
  • Mining SNPs from DNA Sequence Data; Computational Approaches to SNP Discovery and Analysis
  • SNP Identification and Detection Strategies: Whole Genome Sequencing and Re-Sequencing
  • Next-Generation Sequencing Methods: Impact of Sequencing Accuracy on SNP Discovery
  • Scanning Probe and Nanopore DNA Sequencing: Core Techniques and Possibilities
  • Pyrosequencing for SNP Genotyping
  • Prescreening (Melting Based) Methods for SNP Discovery and Analysis
  • Single Nucleotide Polymorphism Screening with Denaturing Gradient Gel Electrophoresis
  • Temporal Temperature Gradient Electrophoresis for Detection of Single Nucleotide Polymorphisms
  • Prescreening (Conformation Based) Methods for SNP Discovery and Analysis
  • Zn(II)-Cyclen Polyacrylamide Gel Electrophoresis for SNP Detection
  • Phosphate-Affinity Polyacrylamide Gel Electrophoresis for SNP Genotyping
  • Estimation of SNP Allele Frequencies by SSCP Analysis of Pooled DNA
  • Phenylethynylpyrene Excimer Forming Hybridization Probes for Fluorescence SNP Detection
  • The Chemical Cleavage of Mismatch for the Detection of Mutations in Long DNA Fragments
  • Mismatch Oxidation Assay: Detection of DNA Mutations Using a Standard UV/Vis Microplate Reader
  • Towards High-Throughput Methods of SNP Genotyping
  • High-Throughput Methods for SNP Genotyping
  • High-Throughput SNP Genotyping: Combining Tag SNPs and Molecular Beacons
  • SNP Genotyping by the 5?-Nuclease Reaction: Advances in High-Throughput Genotyping with Nonmodel Organisms
  • The TaqMan Method for SNP Genotyping
  • Qualitative and Quantitative Genotyping Using Single Base Primer Extension Coupled with Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry (MassARRAY®)
  • SNP Detection Using Trityl Mass Tags
  • Putting the Invader® Assay to Work: Laboratory Application and Data Management
  • SNP Genotyping Using Multiplex Single Base Primer Extension Assays
  • High-Throughput SNP Detection Based on PCR Amplification on Magnetic Nanoparticles Using Dual-Color Hybridization
  • Other Methods
  • Restriction Enzyme Analysis of PCR Products
  • Allele-Specific PCR in SNP Genotyping
  • Modified Multiple Primer Extension Method
  • Detection of SNP by the Isothermal Smart Amplification Method.

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