Spliceosomal Pre-mRNA Splicing : Methods and Protocols /

Detalles Bibliográficos
Autor Corporativo: SpringerLink (Online service)
Otros Autores: Hertel, Klemens J. (Editor )
Formato: eBook
Lenguaje:English
Publicado: Totowa, NJ : Humana Press : Imprint: Humana, 2014.
Edición:1st ed. 2014.
Colección:Methods in Molecular Biology, 1126
Materias:
Tabla de Contenidos:
  • The Pre-mRNA Splicing Reaction
  • Diversity and Evolution of Spliceosomal Systems
  • Mechanisms of Spliceosomal Assembly
  • Alternative Pre-mRNA Splicing
  • Regulation of Alternative Pre-mRNA Splicing
  • Introduction to Co-Transcriptional RNA Splicing
  • Chromatin and Splicing
  • Preparation of Splicing Competent Nuclear Extracts
  • Preparation of Yeast Whole Cell Splicing Extract
  • Efficient Splinted Ligation of Synthetic RNA Using RNA Ligase
  • In Vitro Assay of Pre-mRNA Splicing in Mammalian Nuclear Extract
  • Kinetic Analysis of In Vitro Pre-mRNA Splicing in HeLa Nuclear Extract
  • In Vitro Systems for Coupling RNAP II Transcription to Splicing and Polyadenylation
  • Isolation and Accumulation of Spliceosomal Assembly Intermediates
  • Complementation of U4 snRNA in S. cerevisiae Splicing Extracts for Biochemical Studies of snRNP Assembly and Function
  • Expression and Purification of Splicing Proteins from Mammalian Cells
  • Single Molecule Approaches for Studying Spliceosome Assembly and Catalysis
  • Cell-Based Splicing of Minigenes
  • Quantifying the Ratio of Spliceosome Components Assembled on Pre-mRNA
  • Antisense Methods to Modulate Pre-mRNA Splicing
  • Using Yeast Genetics to Study Splicing Mechanisms
  • Medium Throughput Analysis of Alternative Splicing by Fluorescently Labeled RT-PCR
  • Chromatin Immunoprecipitation Approaches to Determine Co-Transcriptional Nature of Splicing
  • Computational Approaches to Mine Publicly Available Databases
  • Approaches to Link RNA Secondary Structures with Splicing Regulation
  • Methods to Study Splicing from High-Throughput RNA Sequencing Data
  • Global Protein-RNA Interaction Mapping at Single Nucleotide Resolution by iCLIP-Seq
  • Predicting Alternative Splicing.