Multiple Sequence Alignment Methods /

Detalles Bibliográficos
Autor Corporativo: SpringerLink (Online service)
Otros Autores: Russell, David J. (Editor )
Formato: eBook
Lenguaje:English
Publicado: Totowa, NJ : Humana Press : Imprint: Humana, 2014.
Edición:1st ed. 2014.
Colección:Methods in Molecular Biology, 1079
Materias:
Tabla de Contenidos:
  • Dynamic Programming
  • Heuristic Alignment Methods
  • Objective Functions
  • An Appraisal of Benchmarks for Multiple Sequence Alignment
  • BLAST and FASTA Similarity Searching for Multiple Sequence Alignment
  • Clustal Omega, Accurate Alignment of Very Large Numbers of Sequences
  • T-COFFEE: Tree-Based Consistency Objective Function for Alignment Evaluation
  • MAFFT: Iterative Refinement and Additional Methods
  • Multiple Sequence Alignment Using Probcons and Probalign
  • Phylogeny-Aware Alignment with PRANK
  • GramAlign: Fast Alignment Driven by Grammar-Based Phylogeny
  • Multiple Sequence Alignment with DIALIGN
  • PicXAA: A Probabilistic Scheme for Finding the Maximum Expected Accuracy Alignment of Multiple Biological Sequences
  • Multiple Protein Sequence Alignment with MSAProbs
  • Large-Scale Multiple Sequence Alignment and Tree Estimation Using SATé
  • PRALINE: A Versatile Multiple Sequence Alignment Toolkit
  • PROMALS3D: Multiple Protein Sequence Alignment Enhanced with Evolutionary and 3-Dimensional Structural Information
  • MSACompro: Improving Multiple Protein Sequence Alignment by Predicted Structural Features.