Multiple Sequence Alignment Methods /
| Corporate Author: | |
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| Other Authors: | |
| Format: | eBook |
| Language: | English |
| Published: |
Totowa, NJ :
Humana Press : Imprint: Humana,
2014.
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| Edition: | 1st ed. 2014. |
| Series: | Methods in Molecular Biology,
1079 |
| Subjects: |
Table of Contents:
- Dynamic Programming
- Heuristic Alignment Methods
- Objective Functions
- An Appraisal of Benchmarks for Multiple Sequence Alignment
- BLAST and FASTA Similarity Searching for Multiple Sequence Alignment
- Clustal Omega, Accurate Alignment of Very Large Numbers of Sequences
- T-COFFEE: Tree-Based Consistency Objective Function for Alignment Evaluation
- MAFFT: Iterative Refinement and Additional Methods
- Multiple Sequence Alignment Using Probcons and Probalign
- Phylogeny-Aware Alignment with PRANK
- GramAlign: Fast Alignment Driven by Grammar-Based Phylogeny
- Multiple Sequence Alignment with DIALIGN
- PicXAA: A Probabilistic Scheme for Finding the Maximum Expected Accuracy Alignment of Multiple Biological Sequences
- Multiple Protein Sequence Alignment with MSAProbs
- Large-Scale Multiple Sequence Alignment and Tree Estimation Using SATé
- PRALINE: A Versatile Multiple Sequence Alignment Toolkit
- PROMALS3D: Multiple Protein Sequence Alignment Enhanced with Evolutionary and 3-Dimensional Structural Information
- MSACompro: Improving Multiple Protein Sequence Alignment by Predicted Structural Features.