Reviews and Protocols in DT40 Research Subcellular Biochemistry /

Detalles Bibliográficos
Autor Corporativo: SpringerLink (Online service)
Otros Autores: Buerstedde, Jean-Marie. (Editor ), Takeda, Shunichi. (Editor )
Formato: eBook
Lenguaje:English
Publicado: Dordrecht : Springer Netherlands : Imprint: Springer, 2006.
Edición:1st ed. 2006.
Colección:Subcellular Biochemistry, 40
Materias:
Acceso en línea:https://doi.org/10.1007/978-1-4020-4896-8
Tabla de Contenidos:
  • DT40 gene disruptions: a how-to for the design and the construction of targeting vectors
  • Immunoglobulin gene conversion or hypermutation: that's the question
  • Genome resources for the DT40 community
  • Chromosome engineering in DT40 cells and mammalian centromere function
  • Function of RECQ family helicase in genome stability
  • Genetic analysis of apoptotic execution
  • The DT40 system as a tool for analyzing kinetochore assembly
  • Analysing the DNA damage and replication checkpoints in DT40 cells
  • Using DT40 to study clathrin function
  • Genetic analysis of B cell signaling
  • DT40 mutants: a model to study transcriptional regulation of B cell development and function
  • Transcription and RNA processing factors play complex roles in DT40 cells
  • Participation of histones, histone modifying enzymes and histone chaperonesin vertebrate cell functions
  • Analysis of gene expression, copy number and palindrome formation with a DT40 enriched CDNA microarray
  • Calcium signaling, ion channels and more
  • Analysis of DNA replication damage bypass and its role in immunoglobulin repertoire development
  • The fanconi anemia pathway promotes homologous recombination repair in DT40 cell line
  • Phenotypic analysis of cellular responses to DNA damage
  • ATM, a paradigm for a stress-responsive signal transducer in higher vertebrate cells
  • Stable non-targeted transfection of DT40
  • Basic cell culture conditions
  • Excision of floxed-DNA sequences by transient induction of MER-CRE-MER
  • Immunoglobulin gene conversion and hypermutation assay by facs
  • Target screening by PCR
  • Mitotic index determination by flow cytometry
  • Centrifugal elutriation as a means of cell cycle phase separation and synchronisation
  • Preparation of genomic DNA for microarray-based comparative genome hybridization
  • Analysis of cellular Mg2+ in DT40 cells
  • Transient transfection of DT40
  • Retroviral transduction of DT40
  • Colony survival assay
  • Subcloning DT40 by limiting dilution
  • Subnuclear immunofluorescence
  • Sister chromatid exchange assay
  • 2D cell cycle analysis
  • Purification of tap-tagged proteins by two-step pull down from DT40 cells
  • Synchronization of cells
  • Targeted transfection of DT40 cells
  • Luciferase reporter assay
  • Indirect immunofluorescence microscopy
  • Quantification of receptor-mediated endocytosis
  • Measurement of DNA synthesis and strand breaks using alkaline sucrose density gradient centrifugation
  • Isolation of nuclear and cytoplasmic proteins from DT40 cell lines.