miRNA Biogenesis : Methods and Protocols /

Bibliographic Details
Corporate Author: SpringerLink (Online service)
Other Authors: Ørom, Ulf Andersson Vang. (Editor)
Format: eBook
Language:English
Published: New York, NY : Springer New York : Imprint: Springer, 2018.
Edition:1st ed. 2018.
Series:Methods in Molecular Biology, 1823
Subjects:
Table of Contents:
  • High-throughput characterization of primary microRNA transcripts
  • Identifying pri-miRNA transcription start sites
  • Metabolic pulse-chase RNA labelling for pri-miRNA processing dynamics
  • In Vitro System for Coupling RNAP II Transcription to Primary microRNA Processing and a Three-way System for RNAP II Transcription/Splicing/microRNA Processing
  • Purification of Microprocessor-associated factors
  • Arresting pri-miRNA processing with Target Site Blockers
  • MicroRNA analysis using the quantitative real-time PCR reaction
  • MicroRNA analysis using next-generation sequencing
  • Identification of microRNA precursor-associated proteins
  • Analysis of 3' end modifications in (precursor-) microRNAs by high-throughput
  • Uncovering the stability of mature miRNAs by 4-thio-uridine metabolic labeling
  • Detection of microRNA-target interactions by Chimera PCR (ChimP)
  • High-quality overlapping paired-end reads for the detection of A-to-I editing on small RNA
  • Targeting miRNA for therapeutics using a Micronome based method for identification of miRNA-mRNA pairs and validation of key regulator miRNA
  • Method for detection of miRNAs in non-model organisms with unreported database
  • Detection and Verification of Mammalian Mirtrons by Northern Blotting
  • Detecting agotrons in Ago CLIPseq data.